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How to apply a custom tip washing process to your Tecan Fluent

Learn how to modify the standard tip washing behaviour of your liquid-FCA.

Updated over 3 weeks ago

Synthace allows you to customise how tip washing is performed on your Tecan Fluent by selecting and modifying wash scripts at the device configuration level.

This is particularly useful when working with:

  • Sticky proteins

  • Sensitive assays

  • High cross-contamination risk workflows

  • Custom Robocolumn processes

Tip washing behaviour is controlled through two configurable scripts: a Comprehensive Wash Script and a Regular Wash Script.


What you can control

Using the configuration tool in Synthace Hub, you can:

  • Modify the wash behaviour executed at the start of workflows

  • Control washing between different liquid handling steps

  • Adjust flush and wash volumes

  • Reduce cross-contamination risk

  • Ensure air gaps and liquid lines are properly reset

All changes are applied through device configuration and uploaded to the Synthace platform.


Understanding the two wash script types

1. Comprehensive Wash Script

The Comprehensive Wash Script runs:

  • At the start of any workflow using the Tecan Fluent

  • After any workflow pause

  • At the beginning of Robocolumn workflows

This script serves two primary purposes:

  1. Clears trapped air from liquid lines (FCA lines)

  2. Resets air gaps within the tubing above aspirated samples

This ensures clean priming and consistent liquid handling before processing begins.


2. Regular Wash Script

The Regular Wash Script runs between liquid handling steps.

For example:

  • Switching from sample loading to wash buffer

  • Changing between equilibration buffer and elution buffer

This script determines how tips are washed between handling different liquids.

You can customise:

  • Number of wash cycles

  • Flush steps

  • Wash volumes

  • Sequence of wash/flush actions


Step-by-step: modifying tip washing behaviour

Step 1 – Open the Configuration Tool

  1. Navigate to Synthace Hub.

  2. Open the Device Configuration Tool.

  3. Locate the configuration for your Tecan Fluent.

You will see dropdown options for:

  • Comprehensive Wash Script

  • Regular Wash Script


Step 2 – Select or modify a wash script

  1. Choose the script you want to update from the dropdown menu.

  2. If needed, edit the underlying script in Fluent Control.

  3. Modify flush and wash steps as required:

    • Adjust wash volumes

    • Add or remove wash cycles

    • Configure flush steps


Step 3 – Generate a new configuration

  1. After selecting the desired script, click Generate Configuration.

  2. Upload the new configuration to the Synthace platform (using the standard upload process).

Once uploaded, the updated wash behaviour will apply to future executions.


Important: Work table consistency

The wash script must reference the same work table as the configuration you are generating.

To confirm:

  1. Open your wash script in Fluent Control.

  2. Check the Script Name section.

  3. Verify the associated work table matches the work table used in your Synthace configuration.

If you use multiple work tables:

  • Create duplicate versions of your custom wash script

  • Assign each duplicate to the correct work table

Failure to match work tables may result in incorrect script execution.


Editing the wash script in Fluent Control

Inside the wash script:

  • Define flush steps

  • Define wash steps

  • Adjust liquid volumes

  • Configure step sequences

These changes will be reflected automatically when the script is executed via Synthace.

The script structure is intentionally simple, making it easy to tailor washing behaviour to your application.


Best practices

  • Increase wash cycles when handling sticky proteins

  • Use higher wash volumes for viscous reagents

  • Validate new wash scripts with a test run before production workflows

  • Maintain version control when duplicating scripts for multiple work tables


When should you modify tip washing?

Consider adjusting wash behaviour when:

  • Observing cross-contamination between samples

  • Changing buffer types frequently

  • Working with high-value or sensitive samples

  • Optimising Robocolumn workflows


Summary

Tip washing behaviour on the Tecan Fluent can be easily customised through the Synthace device configuration tool. By selecting and modifying comprehensive and regular wash scripts, you can:

  • Improve liquid handling reliability

  • Reduce cross-contamination

  • Optimise workflows for specific assay types

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